CDS

Accession Number TCMCG053C26684
gbkey CDS
Protein Id XP_034224012.1
Location join(10805757..10805925,10806033..10806241,10806528..10806668,10806788..10806961,10807783..10807882,10809821..10809939,10810060..10810182,10810329..10810400,10811558..10811650,10812442..10812555,10812662..10812784,10814112..10814297,10814493..10814567,10815507..10815643,10816038..10816172,10816467..10816606,10816686..10816751,10817716..10817822,10817964..10818044,10818141..10818215,10818313..10818414,10818598..10818766,10818870..10819012,10819229..10819312,10819399..10819499,10819642..10819795,10819994..10820068,10820159..10820306,10820942..10821593,10822241..10822301,10822418..10822563,10822682..10822859,10823170..10823268,10823636..10824018,10824125..10824301,10824777..10824873,10824951..10825106,10825213..10825443,10825538..10825621,10825715..10825819)
Gene LOC117634168
GeneID 117634168
Organism Prunus dulcis

Protein

Length 1927aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA631757
db_source XM_034368121.1
Definition rRNA biogenesis protein RRP5 isoform X2 [Prunus dulcis]

EGGNOG-MAPPER Annotation

COG_category A
Description Protein RRP5 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14792        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGTCTTCCCAGAAACCCCAAGGCAAGAAGAAGGCCAGAGACCCCCCAAAGTTCAACAAGTCCTCCAAAAAGCCATTCAAACCAAACAAGGACCGAAACGACACCGCCCGGTCCGAAGCCGTCGCTTTGCAGCTGGAAGACGACGTCCCTGATTTCCCCAGAGGCGGAGGAAGTGCTTTGAACAGACAGGAGCGCGATGAAATTCGGGCTGAAGTCGATGCAGAATTTGAGGCAGAGGAGCGGGAGATGAAGAAAAGAAAGAAGATAGGGATGCAGAAGAAGAGTCTCTCTTCGGAGGACGATTTAGGTTCGCTTTTCGGTGATGGTATTACTGGAAAACTACCTAAATATGCAAACAAGATCACTATGAAGAACATATCTGCTGGAATGAAGGTTTGGGGAGTTGTTGCTGAAGTAAATGAGAAGGACCTTGTAATTAGCCTTCCAGGGGGATTGCGTGGATTAGTTCGTGCTTCTGAAGCTTTGGATCCTATTTTGGATAATGAAACGAAGGCTGTAGCAGATAATCTCCTTGCTAGCCTATTCCATGTTGGACAGCTGGTATCTTGCATTGTGTTGCAGTTGGATGAGGATAAGAAAGAGAAAGGGAAAAGGAAGATCTGGCTTTCTTTGCGCCTATCTTTGTTGCATAAGGGCTTCACTTTGGATTCTGTCCAAGAAGGCATGGTCCTTACTGCATATGTTAAAAGCATTGAAGATCATGGTTACATTCTTCATTTTGGCTTATCTTCATTCACGGGGTTCTTGCCAAAAAATTGCCCAGCTGATAGCAAGGAGATTCAAGTGAACACTGGGCAACTACTTCAAGGCGCTGTTAGAAGTATTGATAAAGTCCGCAAGGTTGTGTATTTGAGTTCAGACCTAGAAACTGTATCAAAATGTGTGACCAAGGATCTCAAGGGAATTTCAATTGATCTACTTGTTCCAGGCATGCTGGTTAATGCTCGTGTGCTATCCACCCTTGAAAATGGGGTTATGTTATCATTTCTTACTTACTTTACTGGAACTGTTGACATATTTCATCTGCAAAATAGTTACCCTACCCTAAACTGGAAGGAGGATTATAATCAACACAAGAAGGTTAATGCTCGAATATTGTTTATTGACCCTTCAACTAGAGCTGTTGGTTTGACACTGAATCCACATCTTGTCCGCAACAAGGCTCCTCCTTCACCTGTCAAAATTGGAGACATATGTGATGGCTCAAAAGTAGTCAGGGTAGATAGAGGGTTGGGTCTTCTGCTTGAAATACCATCTACCCCAGTTTCAACTCCGGCATACGTTAGTATATGTGATGTGGCTGAAGAGGAAGTTCGGAAGCTTGAAAAGAAGTTCAAGCAAGGTAGTCATGTTCGCGTCAGAGTTCTTGGTTTTAGGCACTTAGAAGGACTTGCGACAGGGATTTTGAAGGCCAGTGCTTTTGAAGGAACAGTGTTCACTCACTCAGATGTCAAGCCTGGGATGGTGGTGAAAGGTAAAATCATAGCTGTTGACAGCTTTGGTGCTATAGTGCAATTTCCTGGTGGTGTGAAGGCACTTTGCCCTCTTAATCATATGTCTGAATTTGAAATTGCAAAGCCTAGAAAAAAATTTAAGATTGGAGCTGAACTTCTGTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACCGTTACACACAAGAAAACACTTGTGAAATCTAATCTTGGGATTGTAAGTTCATATGCTGACGCAGCTGGTGGATTAATAACCCATGGCTGGATAAGAAAGATTGAAGAACATGGATGCTTTATCCATTTTTACAATGGGGTCCAAGGATTTGCACCAAGATCTGAACTCGGATTAGAACCAGGATCCGATCCAAGTTCCATGTATCATGTTGGGCAAGTTGTCAAATGTAGAGTTATTAATTCTAATCCTACATCAAGGCGGATCAAGCTTAGCTTCATAATAAGGCCCCCAAGGGTTTCTGAGGATGATATGGCCAAGTTGGGTTGCCTTGTTTCAGGAGTTGTTGATCGAGTAACCCCCAATGCTGTTTATGTTAATGGAAAAGGTTACTCGATGGGTACAATTTTTACTGAACACTTGGCAGATCACCACGGGCTTGCTGCTTTGATGAAGTCAGTTTTGAAGCCTGGATATGAATTTGATCGGTTGCTGGTATTAGACATTGAAGGGAACAATCTGATCCTCTCTGCAAAATATTCTCTGATTAATTCAGCTCAGCAGCTTCCCTCAGAACTTAGTCAAATTCATCCTAACTCAGTAGTACATGGCTACATTTGTAACTTAATTGAAACTGGGTGCTTTGTGCGCTTTCTTGGGCGTTTGACTGGTTTCTCCCCCAGGCATAAGGCAATGGATGACCATAAAGCTGATCTTTCAGAAGCCTATTACATTGGACAATCTGTTCGCAGTAATATACTCGATGTTAGTAGTGAAACAAGTCGAATAACTCTGTCGTTGAAGCAGTCGTCTTGCACTTCAACAGATGCGTCCTTTATTCAGGAATACTTTATTTTGGAGGAAAAGATTGCTAAGCTGCAATTGTTGGACTCAAAAGAACCCAAGTCAAATTGGTCAGAAGGATTTACAATTGGCAGTGTTGTTGAGGGAAAAGTACAGGAGGTAAAGGACATTGGAGTTGTTGTCGGCTTTGAGAAATATAATGATGTCTTTGGTTTCATCACACACTATCAATGTGGTACCAATGTAGAAACAGGCTCCATCATTCAAGCAGTTGTCCTCGATATTGCCAATGCAGAGCACCTTGTTGATTTATCGCTGAAACAAGAGTTCAATAATAAATTAAAAGAAAGTTCTAACAGCCAAACTCATAAGAAGAAACGAAAAAGAGAAGCTTCAGATGGCCTGGAGGAACATCAGACAGTAAATGCAATTGTTGAGATTGTGAAGGAGAATTACCTGGTTCTTTCAATCCCGAAGTATAACTATGCTATAGGATATGCATCAATCTCTGACTACAACACTCAAAAATTTCCTCAGAGACAGTTTTTGAATGGACAAAGTGTCAATGCCATGGTCATGGCCCTTCCAAGCCCTACAACAGCAGGAAGGTTGCTTATGCTACTTAACTCTCTAAGTGAGTCCGCTGAGACATCCAGTTCAAAAAGGGCAAAAAAGAAGTCCAGCTATAAAGTGGGATCTGTGGTTCAGGCTGAGATTACTGAAATAAAGCCTCTTGAACTAAGATTGAAATTTGGAATCGGCTTTCATGGGCGAGTTCATATAACAGAGGTAAATGATGAGCTTCTGGAAGAACCATTTAATAACTTCAGAATTGGGCAAACAGTGACTGCAAGGATCGTTGCTAAGACTAATTATTCAAATAGCAACAAAAAGAGCTATCAGTGGGATCTTTCCTTGAAACCTACCATGCTAACAGGTTCCTGCGAAATAGGGGAGAAGATTATGACTGAAGATCTCGATTTCTCAACAGGGCAATGTGTCACTGGTTATGTTTATAAAGTGGATGGTGAATGGGTCTGGTTGACCATATCTCGAAATGTTAGGGCTCAGCTTTTTATTCTTGATACTGCTTGTGAGCCTAGTGAACTTCAAGAGTTTCAGAAACGCTTTCATCTGGGAAATGCTGTATCTGGTTATGTATTAAGTGTTAACAAGGAGAAAAAGCTATTGCGACTAGTTCTGCATCCTTTATTTCCCGTCTCTGGCAAAACTGTTGATCATGAAGTTTCAAAGATGGAAGATCCGCACAATAACATCTTGAATGAGAATGTAACTGCTCATATTCGCGAGGGAAGTGTTGTAGGTGGGAGAATAATAAAAAAACTTCCGGGTGTTGGTGGTTTGACCGTGCAAATTGGTCCCCATATGTATGGCAGGGTTCATTATAGTGAACTTTCTGACTCATGGGTTACTAACCCATTGTCTGGATATCATGAAGGGCAATTTGTCAAATGCAAGGTCCTTGAACTTATCCGCTCTGTAAGGGGAACTTATCACATAGATTTGTCATTACGCTCTTCTTTAGTTGGCATGCTTGGTCCAGATTGCAAGGGATCCCATGATGGCACGCATGCTCATACCAAACGCGTGGAAAAGATCGAAGATCTTAATCCTAATATGATGGTTCAGGGTTATGTGAAAAATATTACTCCAAAAGGATGTTTTATTTTTCTTTCCCGGAAGATTGATGCCAAAATTCTTGTCTCCAATTTATCTGATGGATATGTTCAAGATCTTGAAAAAGAATTCCCAGTTGGAAAACTTGTAATTGGCAGGGTGTCATCTGTAGAGCTGCTATCGAAGCGAGTTGAAGTGACATTGAAGTCATTGGGTGCAACCAGTGCGACACAATCTGGAAGTAATAATAGCTTGCATGTTGGAGATATTATCTCTGGCAGGGTAAAACGGGTGGAGCGATATGGTTTATTCATCACGATTGACAATACAAACGTGGTTGGACTATGCCATGTGTCAGAGCTTTCAGAAGATAAAGTAGAGAATATTGAAACCAAGTACAGAACAGGAGAGAGGGTGACAGCAAAAGTATTGAAGGTGGACAAAGATAGGCACCGAATTTCTCTTGGGATGAAGGATGTATATATCATGGAAAATAATGACCTTCAAACGTCCTCAGAACAAGATCCTGATGAAGACATTATAGAAAATGGCATAACGGATGGTAGTTTGTCTGCAATGTTTCCTGGAAGCAGTTCGTTTTGTACCCAAAACATGGATGTTGAATATGAAAATGCAGAGCCTCAGTTTCTTGCACAAGCAGAATCAAGAGCTTCTGTTCCTCCTCTTGAAGTCACTCTTGATGACTTAGAGCAATTCAACGGTGATAATATTGTTAGTCAAGATCAAGAACATCCTGATGTGGACACTGTCAATGAAAAGAAAAAGCAGCTTACAAAGAAAAAAGCTAAGGAAGAAAGGGAGCGTGAGATAAGGGCTGCCGAGGAAAGACTGTTGGAGAAGGATATACCAAGAACTGATGAGGAGTATGAGAAACTAGTTAGAAGTTCTCCAAATAGCAGTTATGTTTGGATAAAGTACATGGAATTTGTTCTCTCTACGGCTAATGTTGAGAAGGCACGCTCTATTGCCGAAAGGGCTTTGCGAACAATAAACTTCCGAGAAGAGAATGAGAAGCTCAATATTTGGGTGGCCTATTTTAATTTGGAAAACAAATATGGAAGTCCTCCAGAGGAGGCTGTAATGAAAGTCTTCCAAAGAGCAGTGCAGTATAATGATCCCAAAAAGGTTCATCTAGCACTCTTAGGAGTGTATGAAAGGACTGAGCAACACAGGTTGGCTGATGAGCTATTTGATAAAATGATCAAGAAGTTCAAGAAGTCTTGCAAGGTTTGGCTAAGGCGGGTCCAGATGCTCTTGACACAACAGCGGGATGGGATTCAGGATGTTGTCAGTCAGGCTGAAAAAGTCCTTCCCAAGCATAAACATATCAAATTCATTTCACAGACAGCCATCCTTGAGTTTAAATGTGGAAATCCAGAGAGAGGGCGATCCATGTTTGAAAATATTTTGCGGAATAATCCAAAGAGAACAGACTTGTGGAGCGTCTATCTTGATCAAGAAATTCGACTTGGAGATGGTGATCTGATACATGCACTATTTGAGCGGGCAACTAGTTTGAGCCTCCCAGCAAAAAAGATGAAATTCTTATTCAATAAGTATCTGCAGTATGAGAAGTCTCATGGTGATGAAGGGAAGATCGAATATGTGAAACAGAAGGCAATGGATTATGTGAATTCTGTGGCTTGA
Protein:  
MAASSQKPQGKKKARDPPKFNKSSKKPFKPNKDRNDTARSEAVALQLEDDVPDFPRGGGSALNRQERDEIRAEVDAEFEAEEREMKKRKKIGMQKKSLSSEDDLGSLFGDGITGKLPKYANKITMKNISAGMKVWGVVAEVNEKDLVISLPGGLRGLVRASEALDPILDNETKAVADNLLASLFHVGQLVSCIVLQLDEDKKEKGKRKIWLSLRLSLLHKGFTLDSVQEGMVLTAYVKSIEDHGYILHFGLSSFTGFLPKNCPADSKEIQVNTGQLLQGAVRSIDKVRKVVYLSSDLETVSKCVTKDLKGISIDLLVPGMLVNARVLSTLENGVMLSFLTYFTGTVDIFHLQNSYPTLNWKEDYNQHKKVNARILFIDPSTRAVGLTLNPHLVRNKAPPSPVKIGDICDGSKVVRVDRGLGLLLEIPSTPVSTPAYVSICDVAEEEVRKLEKKFKQGSHVRVRVLGFRHLEGLATGILKASAFEGTVFTHSDVKPGMVVKGKIIAVDSFGAIVQFPGGVKALCPLNHMSEFEIAKPRKKFKIGAELLFRVLGCKSKRITVTHKKTLVKSNLGIVSSYADAAGGLITHGWIRKIEEHGCFIHFYNGVQGFAPRSELGLEPGSDPSSMYHVGQVVKCRVINSNPTSRRIKLSFIIRPPRVSEDDMAKLGCLVSGVVDRVTPNAVYVNGKGYSMGTIFTEHLADHHGLAALMKSVLKPGYEFDRLLVLDIEGNNLILSAKYSLINSAQQLPSELSQIHPNSVVHGYICNLIETGCFVRFLGRLTGFSPRHKAMDDHKADLSEAYYIGQSVRSNILDVSSETSRITLSLKQSSCTSTDASFIQEYFILEEKIAKLQLLDSKEPKSNWSEGFTIGSVVEGKVQEVKDIGVVVGFEKYNDVFGFITHYQCGTNVETGSIIQAVVLDIANAEHLVDLSLKQEFNNKLKESSNSQTHKKKRKREASDGLEEHQTVNAIVEIVKENYLVLSIPKYNYAIGYASISDYNTQKFPQRQFLNGQSVNAMVMALPSPTTAGRLLMLLNSLSESAETSSSKRAKKKSSYKVGSVVQAEITEIKPLELRLKFGIGFHGRVHITEVNDELLEEPFNNFRIGQTVTARIVAKTNYSNSNKKSYQWDLSLKPTMLTGSCEIGEKIMTEDLDFSTGQCVTGYVYKVDGEWVWLTISRNVRAQLFILDTACEPSELQEFQKRFHLGNAVSGYVLSVNKEKKLLRLVLHPLFPVSGKTVDHEVSKMEDPHNNILNENVTAHIREGSVVGGRIIKKLPGVGGLTVQIGPHMYGRVHYSELSDSWVTNPLSGYHEGQFVKCKVLELIRSVRGTYHIDLSLRSSLVGMLGPDCKGSHDGTHAHTKRVEKIEDLNPNMMVQGYVKNITPKGCFIFLSRKIDAKILVSNLSDGYVQDLEKEFPVGKLVIGRVSSVELLSKRVEVTLKSLGATSATQSGSNNSLHVGDIISGRVKRVERYGLFITIDNTNVVGLCHVSELSEDKVENIETKYRTGERVTAKVLKVDKDRHRISLGMKDVYIMENNDLQTSSEQDPDEDIIENGITDGSLSAMFPGSSSFCTQNMDVEYENAEPQFLAQAESRASVPPLEVTLDDLEQFNGDNIVSQDQEHPDVDTVNEKKKQLTKKKAKEEREREIRAAEERLLEKDIPRTDEEYEKLVRSSPNSSYVWIKYMEFVLSTANVEKARSIAERALRTINFREENEKLNIWVAYFNLENKYGSPPEEAVMKVFQRAVQYNDPKKVHLALLGVYERTEQHRLADELFDKMIKKFKKSCKVWLRRVQMLLTQQRDGIQDVVSQAEKVLPKHKHIKFISQTAILEFKCGNPERGRSMFENILRNNPKRTDLWSVYLDQEIRLGDGDLIHALFERATSLSLPAKKMKFLFNKYLQYEKSHGDEGKIEYVKQKAMDYVNSVA